FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006023

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006023
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences711927
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAGAA6458.150529E-49.8276551
AAACATT10902.1604696E-58.3499352
AAGCAAG7750.00457458948.1291685
CTTCAAC10157.271029E-47.63297371
CTCAAAA10200.0064188316.90505171
AGTCACT2800.00489064356.373738130-134
Produced by FastQC (version 0.11.5)