FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006028

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006028
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1024132
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGCAA4200.003066311812.0913781
CTCCAAT7400.00218194378.8234381
CTCCTTT18901.6934791E-98.0609191
CCTTATT8250.00582416267.9143561
CCTCAAT8300.00614865737.866681
TGCGCGC12055.1230865E-57.7939219
CCCCCCC2150.00101864627.397502115-119
CTTGACA10000.00397459467.2548271
CTTATAA12355.481103E-47.0492251
CTTTTAT22153.6299753E-86.87816521
CTCTTTT19105.405528E-56.07734161
CATTTTG15750.00135283685.96384145
CTTTCTG17250.00380492145.4674061
Produced by FastQC (version 0.11.5)