FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006031

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006031
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences613001
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT2104.7536122E-420.4166987
CACGTCT2350.001013292818.2447099
ACACGTC3100.006429048713.8306668
GAGCACA4252.4453504E-413.4597844
AATTTTC10206.5553025E-47.7069315
ATTTCAA12050.00382399336.52370935
GTCACGA3300.00267813665.63320-24
Produced by FastQC (version 0.11.5)