FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006034

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006034
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences564493
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGATAGC5008.9258363E-411.5422346
AGACTTT5950.0037976039.6993574
GAATCTT8000.0046406958.1156334
TTTACCA10000.00420018337.2126187
CAAATCC10200.00508393447.07244833
TTCAACA10300.00558918537.00378272
Produced by FastQC (version 0.11.5)