FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006039

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006039
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1038239
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTCGAA10104.4407416E-47.993371
CTTCGAT11150.00127664597.24063161
CATTGAT13852.3546937E-46.8889371
CGACAAA10900.0081956636.73336461
GAAAACT13150.00122108876.57006262
CTCAAAA13900.00183861666.3361441
CTTTATT17559.474684E-56.27296351
CAAAGAG13050.0066589346.18643951
CAATTTT16303.1793243E-46.1831914
CTTTCTG17851.1961723E-46.16753531
CAACGCC16600.00210293965.7476971
AGATATT18400.0088797485.08625034
Produced by FastQC (version 0.11.5)