FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006044

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006044
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences434905
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATAAGT3100.00645110413.8222297
CTCCAAT3200.00779718413.4319861
AGAATCA5300.001579302810.7796015
CGGCACA4800.00930855210.4146663
GAAGGCT4200.00355891495.1120195135-139
Produced by FastQC (version 0.11.5)