FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006045

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006045
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences657547
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACTGAG2700.002546308815.8984726
CTTTTAT11603.079549E-910.5255931
CCACCGT5750.00296916449.9925831
TTGTGGC5950.00407099079.6185129
GAATTCA7854.1677692E-49.1137736
CTTCAAT8801.2635361E-48.9777121
CTTCTAT7750.00362850478.3405841
CTTTTAA9653.428294E-48.1869281
CTTAAAA8050.00510900938.0297551
CTTCAAA11700.00266480866.7524661
CTTCTTT18350.00148357315.47958371
Produced by FastQC (version 0.11.5)