FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006047

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006047
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences514242
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTAAAA7803.208925E-510.1742621
TCAAAAC6300.0063362599.1148953
CTTTGAT7450.00243557348.7154741
ATGAAGT7450.0025502418.6713853
CTGAAAT9100.00166197767.9279961
Produced by FastQC (version 0.11.5)