FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006069

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006069
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1079915
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTAAAG8651.0791975E-49.1100421
CTCCGAT7700.00350629568.373281
CCTCCAT12350.0048281026.38071731
CTTTTAC15950.00174339445.83883861
CAAATAA16450.00251822085.6613661
CTTTCAT17600.0055930085.2914471
CTTCAAA19100.00254163965.2509571
CTTTTCT24808.955222E-55.19953631
Produced by FastQC (version 0.11.5)