FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006071

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006071
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences581017
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACTTCG4550.00596838811.0581351
AACATCT7452.3937445E-49.6314314
CATTGAT8851.3317607E-48.9339731
CTTTTGA9600.00291614237.4872791
CTTTTCG10609.2906924E-47.45902441
ATTTGAA11550.00230629286.84551241
TATTTCC10500.00709298356.83372835
ATCCCCA4455.65677E-45.4283633145
Produced by FastQC (version 0.11.5)