FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006080

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006080
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1962325
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGAGC8050.00591301557.90174873
CACCCGA8550.0097732387.4701131
CCCGGCT19651.7129249E-56.1395591
CAACGAA15150.00105479466.0894981
CAGATCC20752.602421E-45.44977333
GATTTGG16900.0040726345.43667275
Produced by FastQC (version 0.11.5)