FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006084

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006084
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences986743
Sequences flagged as poor quality0
Sequence length100-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAATT4604.1434428E-412.6470411
CTTTTAT12759.516778E-57.41463851
GTTCGAC13151.3938232E-47.18909841
CTTCGGG15450.00662768735.6481941
GGAAAGC17350.0044369915.39656972
Produced by FastQC (version 0.11.5)