FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006097

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006097
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences740103
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT2308.228531E-418.8196817
GAGCACA4007.4534855E-616.237464
AGTAAGC3250.00825405913.3185438
TACCGCG4250.003492532511.882237
CCCAGAT7151.4206304E-410.1439451
TCGAAGA6759.832047E-49.6287062
GATCTTC9552.9219402E-48.3095625
CGAAAAG10658.8814745E-47.49127961
TTCAAAC10000.00419485947.2142117
CAGATTT10500.00671550866.8729993
GAATTTC13550.00166629916.3911284
AGAAATA15900.0098834975.44652754
Produced by FastQC (version 0.11.5)