FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006098

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006098
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences484183
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTAGC450.00983667648.0826
GGAGACC2400.00916945217.665506145
CTATTTA3800.00150785913.2871884
TCAAGCT4150.002925597812.1653257
CTTTAAA7008.96036E-611.4173311
CATCTAC4750.00758209810.7071621
CTTTTAC7101.2981096E-410.2332031
TCAAGGA6150.00498719659.3837912
CAGAGAA7300.00189860548.9575571
TTAAATT9650.00296254717.47465753
TTGATTT13050.0079425476.0805892
Produced by FastQC (version 0.11.5)