FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006103

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006103
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5058424
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAGAC19554.919108E-45.56036661
CTCGTAT23753.7765032E-55.4924721
CTCGCAA18800.00180664015.3967111
CTCAAAT43202.2555469E-105.36815641
CCCAACT17700.0052316155.3226641
CTCAGAT30102.0069765E-65.2968191
CTCCAAT45651.8553692E-105.23880341
CTCCGCT40406.9267116E-95.20206261
CCTCAAC30853.2038388E-65.16804741
CCCTGAT47701.1823431E-105.16558461
GTTCGAG21300.00154868835.1035291
CCCCACC24152.8369526E-45.1014161
CCCGCAT38406.1907485E-85.0955551
CAACGAT51253.274181E-115.09058331
Produced by FastQC (version 0.11.5)