FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006112

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006112
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences821633
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCTATT2650.002089836916.3766351
GATATAC9402.4495635E-48.4466485
CTTTCAA13300.00131666796.5260271
AAAGAGC12800.00647298576.20300676
CAAAAAG20853.1642114E-55.8974211
TCATCCA15400.00693974045.624454
AAAAGAT21402.9794956E-45.3969973
Produced by FastQC (version 0.11.5)