FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006113

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006113
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1653680
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTCGCT9855.2306254E-47.87306261
CCCACAG10459.83785E-47.4210211
GTTGAAT12150.00481633566.38268851
CTTTAAT22303.3530468E-66.0067011
CTTCAAC15700.00174979625.83755451
CTTCGCC21855.6072866E-45.1624491
Produced by FastQC (version 0.11.5)