FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006119

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006119
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2151493
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTGGAT12759.73904E-57.401981
CCCAAAC11000.0099541986.5996671
CTCTCCT15450.00101627766.108431
CTCCAAT17000.00318189155.5514851
GTTCACC18350.00130036655.53868531
CTCTGAA17450.00433211175.40832331
TTCTGTG23752.3160788E-45.17088847
CTTTCAC21300.00151171635.11241771
CACAAAT21350.0015594785.10044531
Produced by FastQC (version 0.11.5)