FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006121

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006121
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1432032
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTCT4600.00703888810.8172549
CCCAAAT11653.5142677E-47.3284381
CTCTGAT10500.0077166226.77589651
GATTAAA14200.00334175446.0077975
AATGTTT19250.00308021045.1712493
CAGACGG19400.00336853025.13431361
Produced by FastQC (version 0.11.5)