FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006130

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006130
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences946384
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT3252.5644067E-517.5332957
CACGTCT4008.443778E-616.0265279
ACACGTC3656.9315836E-515.6118378
AGCACAC5903.2326698E-410.8660175
GCACACG6104.400948E-410.5091986
AGAGCAC7050.00165759899.0940273
CATCATA13950.00267875366.1272279
AAAGCAA15950.00186481435.80580575
CGAAAAA19656.2265596E-45.4624381
Produced by FastQC (version 0.11.5)