FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006131

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006131
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1125690
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAAT8800.00137644568.0828141
CCCGGAT16208.0574864E-77.464131
CCCTGAT10450.0073839576.80658051
CCATTAT11850.00337750676.60266971
CTTCAAA20402.9331883E-55.9273971
CTTTTAT20550.00122941545.19188071
Produced by FastQC (version 0.11.5)