FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006154

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006154
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1523356
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGATT8306.3995976E-48.73214151
CTTGAAT15853.508023E-67.31626751
CCCGAAT10500.00645148476.902551
CTAAAAT17201.1823624E-56.7420261
CCCAGAT12050.00330805486.61613751
GTCAAAG18700.0099195.03849271
Produced by FastQC (version 0.11.5)