FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006163

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006163
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences618513
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATTCTAG700.001364353939.328028
CACACGT1802.1618747E-422.9413457
ACACGTC2300.001128606517.9540968
CACGTCT2550.002251656316.193899
AGCACAC4052.240897E-413.5992695
GTCAAAT4450.00691688910.8411531
CTTTCAG11605.7215446E-57.7236541
Produced by FastQC (version 0.11.5)