FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006167

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006167
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences716211
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCACCT4150.002981438812.1359571
CACAATT4857.07186E-411.8678581
CCCGCAT6557.719021E-49.88610651
AATACAC6400.00729316948.9609617
AATTTTG12350.00478795266.38513855
AAAGATT14850.0049218695.80145032
Produced by FastQC (version 0.11.5)