FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006168

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006168
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences514243
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCAACTC3050.00833334417.959694145
CTAAAAA6156.7348377E-410.0328921
CAAAAAT11450.00345718886.5863671
TAAAAAT13250.00235624226.19635152
Produced by FastQC (version 0.11.5)