FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006204

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006204
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1216525
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACGATA13950.00228139186.2159562
ATTTGCT15300.00638890645.66725646
AAACGAA15450.00711599645.61223465
CTTTTGT20751.8319588E-45.58475071
CTTTTAT27109.8436085E-65.34518341
Produced by FastQC (version 0.11.5)