FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006213

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006213
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1462989
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATAGAG8450.0082628567.61168587
CAAGGAT17159.4746734E-56.273551
CTCAAAA18800.00205301845.3414161
TTGAATT21804.417708E-45.25018172
CATCAAT24758.517946E-55.2165521
Produced by FastQC (version 0.11.5)