FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006216

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006216
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1161319
Sequences flagged as poor quality0
Sequence length100-151
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTACGGA8255.9319247E-48.7985051
CTGAGAT8608.96708E-48.4404261
CTCTGGA12357.3790707E-68.2285611
CTGAAGC9700.00307519047.4481453
TAAAACC10550.0069601596.8483529
CTTAAAA17801.9143703E-56.5247341
AATTTGC12250.0040608426.4874875
CACCAAA13500.00149874246.45223671
TGCGGAT16700.00272332045.62426049
CTTTCCG21400.00160860035.087921
Produced by FastQC (version 0.11.5)