FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006218

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006218
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences994135
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCACCG4400.005145010511.2820561
TCAGGTT10350.0072956816.81488853
CTTTTTT28207.094059E-116.78980831
TTTAAAG12450.006129036.23600672
ATTGGCA13100.0098828235.95475961
CTCATCG17257.9693244E-45.75548271
ATTTTGC20301.9552957E-45.5590586
CTTCAAA18850.00244585155.2669541
Produced by FastQC (version 0.11.5)