FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006230

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006230
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences793955
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTCGAT7600.00259313668.6565971
CATTCAT8050.00436082448.17268851
CTTCATA9853.538202E-48.1634691
CCCTTTT9100.00146189238.0329841
CTTCATT10950.00109836097.34339481
CTTCAAA12003.6111925E-47.3100151
CTTTTAT13551.8886662E-47.0132991
CTTGAAA13551.8886662E-47.0132991
GGATGCC13700.0091109986.6589994145
CTTTTCT14200.00244289756.1774781
TTCATTT16600.00255075545.65475232
Produced by FastQC (version 0.11.5)