FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006231

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006231
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1382229
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTAACAT6550.0099376098.6297438
GTTCAGT8550.00924663157.5163261
CTCGCGG14505.761357E-46.4018361
CTTTGGT13100.00921187555.99584771
CTTCGGA16150.00210427525.7477791
CAAAATT16850.00389017655.4575243
Produced by FastQC (version 0.11.5)