FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006245

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006245
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1343534
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGCTAC4500.00587859311.0824061
ATCAGTC8450.00369491229.732791145
GTGGTGT8650.0011932188.2007489
ACATGCC9850.00427198467.2016726
CTTTGCT15350.00117729636.0336971
AGATGGA18854.003955E-45.6448124
Produced by FastQC (version 0.11.5)