FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006255

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006255
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1843785
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACGCAG10150.0059399556.96181069
CAAAGCT21903.1966738E-76.4823681
CACATAT14150.0034247325.99484543
CCCAGAT15950.00194816655.78536031
CATAGAT15650.0099816315.44270371
CAAACTT21303.5506894E-45.33197551
CCCGCAG20300.0010750685.24497031
CCCTGCT18150.00893484155.0841051
CACAAAT18300.0098326775.0424321
Produced by FastQC (version 0.11.5)