FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006256

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006256
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences714720
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCCAGA6657.013161E-510.8756561
CTTTCTT21654.7293724E-118.0173431
AAAGACC9600.0028961577.49306872
CACAAAA10750.00101115257.4005041
CCGAGAG2150.0087203076.7277311
CTTCAAA12800.00633874026.2152671
Produced by FastQC (version 0.11.5)