FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006259

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006259
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences998922
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAAAT5651.346194E-613.52913951
AGAATTG7400.00334823858.416025
CCAAATC9200.00274529597.5347652
ACAACAT11100.00226704476.85784153
CAAATAT10250.0079863836.7514013
CAATCCG11700.0039393136.5061584
Produced by FastQC (version 0.11.5)