FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006265

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006265
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences997655
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGAATAG2900.00386497114.9341131
TAAGGCT5651.9933798E-411.447819
AGTATAC5100.001088265411.2737915
GTATACC5600.002374044610.2666876
GGACTAA1650.0062196847.85781620-24
CCGCAAA15953.173158E-56.78823231
TCATCCG13850.00223633256.2267279
CTTTTGA17206.126923E-45.87524181
Produced by FastQC (version 0.11.5)