FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006270

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006270
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1602863
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAAAT9302.3769712E-48.4713921
CCCAAAA14103.9541107E-46.6034261
TAAATTC12450.00585363676.26420453
GTCGAAA12900.0076163666.1072831
CAAGTTC20904.46661E-55.76693773
CGATTTT19104.820201E-45.5680163
AATTCAA17000.00425223965.4166455
CAAAAAT27651.6988914E-55.18059871
TGTTCAA17950.0080450445.12997065
Produced by FastQC (version 0.11.5)