FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006277

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006277
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences416649
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAATT3350.0096285713.0095851
CTCCATT4750.007593779410.7043791
CTTTAAA7500.00243116388.7164221
ATTAGAT2450.004043596.49070595-99
Produced by FastQC (version 0.11.5)