FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006290

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006290
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences835623
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAGAT4101.9259844E-413.8454241
CAACTAT4700.00836257710.5681811
CCTATGA6400.0079338428.8697231
CTGCGAT7650.00360169568.3479751
AAGTTTG8200.00697946647.75589565
CCCGAAA10600.00106702077.36354451
CAAATAT15050.00102286916.10393763
TCTGTTT16900.00407198165.43575573
Produced by FastQC (version 0.11.5)