FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006297

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006297
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences492096
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTAAGC1751.7833117E-423.6010781
CAATTTG3100.00844302513.2717444
CTTCTAT4707.866649E-411.7168471
CTTCATT7650.004728048.098411
ATCAAAA11655.1114056E-47.09045271
CAAAAAT12208.651452E-46.7708011
GGCAAAA11300.00288469676.7008961
Produced by FastQC (version 0.11.5)