FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006303

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006303
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences571401
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAACAGA5701.6283446E-512.5450811
TTGAGAT5551.8690058E-411.525682
CTGCAAT9700.00339434487.37185141
CTTCCAT9750.00356913227.3340471
CTCTTTT10750.00920315556.65180971
Produced by FastQC (version 0.11.5)