FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006313

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006313
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences408912
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTTGAT3600.001178558613.72757151
CAACAAT4202.4613002E-413.4474171
GCACAAG3250.00962752113.0097415
GCTACGG3850.001981710312.8126237
CTCCAGA4500.006277548610.9820571
Produced by FastQC (version 0.11.5)