FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006315

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006315
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences633062
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCCTATC3150.007201303313.5957817
GTCAGGG4300.0040037111.6666451
CAAAAGT6600.0094041168.6868531
GTTTCAA8000.00492496848.0624851
Produced by FastQC (version 0.11.5)