FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006477

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006477
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1154241
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTTGAG11252.3151046E-47.5984851
CAACGAT11300.0020171266.9344581
AATTTGC14305.278822E-46.4479275
ACATTCT15600.0097105525.45593834
GTAAAAT18400.00170664175.4201151
CATCAAT19750.00414127255.0496261
Produced by FastQC (version 0.11.5)