FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006478

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006478
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences764441
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTAAAT5750.00310744239.9382031
AGCACGC7650.00353689548.36465
TTTGATT12601.2424347E-57.91335772
TTAAATA9450.0027372087.53653142
GAAAACC11350.00211584316.90242
TTCATTC11550.00254317356.7828782
Produced by FastQC (version 0.11.5)