FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006480

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006480
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences910363
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTCGAT9452.6016796E-59.162691
CACCGTT8400.0071842377.73101951
TTCGATA9350.0023736837.64721732
GTTCCAT11500.00211852726.90189551
AATTTTA11550.00247246.8014375
CATAAAT10800.008832916.6811281
Produced by FastQC (version 0.11.5)