FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006483

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006483
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences551189
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTCAGA2000.00820925718.0092581
CTTCGTT4350.00419869811.5921661
CTTTTGA6404.9391158E-511.2557851
Produced by FastQC (version 0.11.5)