FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006486

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006486
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences926505
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCGCGC4550.00603298811.04328258
CCCGCCT7900.00368739858.32642651
CTTCAAA15301.8173541E-67.64313941
TCACAGC8550.0088175827.55592972
ATCAAGA15151.0094397E-46.7539621
TGACCGC11850.00308336436.660019
AATGCAG14455.1776535E-46.4578368
CTTTGAA15250.0054255395.7511491
CAGCTTT21002.468033E-45.46905373
Produced by FastQC (version 0.11.5)