FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006488

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006488
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3310387
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGG19157.5226555E-55.94181161
CTCCGAG15100.0065965525.6516081
AATTTAG19456.0389657E-45.4761545
CTCGTTT24056.2128776E-55.32261561
GTCCCAT21000.00164706455.07971861
CTTTCTA26856.493528E-55.0324211
Produced by FastQC (version 0.11.5)