FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006492

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006492
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1230114
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTCGAT9454.0672403E-69.5300391
CTTTGAT16901.2482009E-46.1487621
CTTCGGA13600.00275333136.11259271
AGAATTT15700.00221290075.7234093
CCGCAAA18905.710505E-45.49809931
Produced by FastQC (version 0.11.5)